Victorian-Bioinformatics-Consortium / nesoni

High throughput sequencing analysis tools
GNU General Public License v2.0
30 stars 10 forks source link

Nesoni issues with CentOS/RHEL? #8

Open cnthornton opened 10 years ago

cnthornton commented 10 years ago

I installed Nesoni on two CentOS servers and a laptop running on Debian. It works perfectly fine on the Debian laptop but I get errors whenever I try to run Nesoni on the CentOS computers. I tried installing it using pip, source, and in a virtualenv but I keep getting this: Traceback (most recent call last): File "/usr/local/lib/python2.7/runpy.py", line 151, in _run_module_as_main mod_name, loader, code, fname = _get_module_details(mod_name) File "/usr/local/lib/python2.7/runpy.py", line 109, in _get_module_details return _get_module_details(pkg_main_name) File "/usr/local/lib/python2.7/runpy.py", line 101, in _get_module_details loader = get_loader(mod_name) File "/usr/local/lib/python2.7/pkgutil.py", line 464, in get_loader return find_loader(fullname) File "/usr/local/lib/python2.7/pkgutil.py", line 474, in find_loader for importer in iter_importers(fullname): File "/usr/local/lib/python2.7/pkgutil.py", line 430, in iter_importers import(pkg) File "nesoni/init.py", line 8, in from reference_directory import Make_reference File "nesoni/reference_directory.py", line 5, in from nesoni import io, grace, config, annotation, legion File "nesoni/io.py", line 7, in from nesoni import grace, legion, selection File "nesoni/legion.py", line 997, in class Make(config.Action): File "nesoni/legion.py", line 1003, in Make make_address = os.environ.get('NESONI_ADDRESS') or socket.gethostbyname(socket.gethostname()) socket.gaierror: [Errno -2] Name or service not known Error in atexit._run_exitfuncs: Traceback (most recent call last): File "/usr/local/lib/python2.7/atexit.py", line 24, in _run_exitfuncs func(_targs, _kargs) File "nesoni/legion.py", line 500, in _check_stages if LOCAL.stages: AttributeError: 'NoneType' object has no attribute 'stages' Error in sys.exitfunc: Traceback (most recent call last): File "/usr/local/lib/python2.7/atexit.py", line 24, in _run_exitfuncs func(_targs, _kargs) File "nesoni/legion.py", line 500, in _check_stages if LOCAL.stages: AttributeError: 'NoneType' object has no attribute 'stages'