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VikParuchuri / marker

Convert PDF to markdown quickly with high accuracy
https://www.datalab.to
GNU General Public License v3.0
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AttributeError: 'NoneType' object has no attribute 'bboxes' #123

Open Volkopat opened 6 months ago

Volkopat commented 6 months ago

Detecting bboxes: 100%|██████████| 2/2 [00:05<00:00, 2.96s/it] Finding reading order: 100%|██████████| 1/1 [00:04<00:00, 4.89s/it] Traceback (most recent call last): File "/app/convert_single.py", line 35, in main() File "/app/convert_single.py", line 26, in main full_text, images, out_meta = convert_single_pdf(fname, model_lst, max_pages=args.max_pages, langs=langs, batch_multiplier=args.batch_multiplier) File "/app/marker/convert.py", line 115, in convert_single_pdf table_count = format_tables(pages) File "/app/marker/tables/table.py", line 138, in format_tables table_rows = get_table_pdftext(page, table_box) File "/app/marker/tables/table.py", line 103, in get_table_pdftext table_rows = assign_cells_to_columns(page, table_box, table_rows) File "/app/marker/tables/cells.py", line 56, in assign_cells_to_columns separators = find_column_separators(page, table_box, round_factor=round_factor) File "/app/marker/tables/cells.py", line 31, in find_column_separators line_boxes = [p.bbox for p in page.text_lines.bboxes] AttributeError: 'NoneType' object has no attribute 'bboxes' Traceback (most recent call last): File "/root/.cache/pypoetry/virtualenvs/marker-pdf-9TtSrW0h-py3.9/lib/python3.9/site-packages/gradio/routes.py", line 534, in predict output = await route_utils.call_process_api( File "/root/.cache/pypoetry/virtualenvs/marker-pdf-9TtSrW0h-py3.9/lib/python3.9/site-packages/gradio/route_utils.py", line 226, in call_process_api output = await app.get_blocks().process_api( File "/root/.cache/pypoetry/virtualenvs/marker-pdf-9TtSrW0h-py3.9/lib/python3.9/site-packages/gradio/blocks.py", line 1550, in process_api result = await self.call_function( File "/root/.cache/pypoetry/virtualenvs/marker-pdf-9TtSrW0h-py3.9/lib/python3.9/site-packages/gradio/blocks.py", line 1185, in call_function prediction = await anyio.to_thread.run_sync( File "/root/.cache/pypoetry/virtualenvs/marker-pdf-9TtSrW0h-py3.9/lib/python3.9/site-packages/anyio/to_thread.py", line 56, in run_sync return await get_async_backend().run_sync_in_worker_thread( File "/root/.cache/pypoetry/virtualenvs/marker-pdf-9TtSrW0h-py3.9/lib/python3.9/site-packages/anyio/_backends/_asyncio.py", line 2144, in run_sync_in_worker_thread return await future File "/root/.cache/pypoetry/virtualenvs/marker-pdf-9TtSrW0h-py3.9/lib/python3.9/site-packages/anyio/_backends/_asyncio.py", line 851, in run result = context.run(func, args) File "/root/.cache/pypoetry/virtualenvs/marker-pdf-9TtSrW0h-py3.9/lib/python3.9/site-packages/gradio/utils.py", line 661, in wrapper response = f(args, **kwargs) File "/app/run.py", line 21, in _fProcessDocument subprocess.run(["python", "convert_single.py", input_path, output_path, "--batch_multiplier", workers], check=True) File "/usr/lib/python3.9/subprocess.py", line 528, in run raise CalledProcessError(retcode, process.args, subprocess.CalledProcessError: Command '['python', 'convert_single.py', '/tmp/gradio/c6f053961a397c3a97eb85201dfeabffc5a9331c/Managing the Design Process-Chpt 6.pdf', '/tmp/gradio/c6f053961a397c3a97eb85201dfeabffc5a9331c/Chapter6/output.md', '--batch_multiplier', '4']' returned non-zero exit status 1.

yuxumin commented 5 months ago

same here, have you figured out what's wrong with that?

Volkopat commented 5 months ago

Downgrading gradio version helped me, I don't have access to my laptop at the moment but somewhere in the issues section you may find the exact version

yuxumin commented 5 months ago

This is so strange, I don't even have Gradio in the environment where I run the marker.

Volkopat commented 5 months ago

Oh my bad the gradio part is what I was working on. As far as I remember, this was a problem with one of the packages in poetry. Take a look at my pyproject.toml:

[tool.poetry] name = "marker-pdf" version = "0.2.9" description = "Convert PDF to markdown with high speed and accuracy." authors = ["Vik Paruchuri github@vikas.sh"] readme = "README.md" license = "GPL-3.0-or-later" repository = "https://github.com/VikParuchuri/marker" keywords = ["pdf", "markdown", "ocr", "nlp"] packages = [ {include = "marker"} ] include = [ "convert.py", "convert_single.py", "chunk_convert.sh", "chunk_convert.py", ]

[tool.poetry.dependencies] python = ">=3.9,<3.13,!=3.9.7" scikit-learn = "^1.3.2" Pillow = "^10.1.0" pydantic = "^2.4.2" pydantic-settings = "^2.0.3" transformers = "^4.36.2" numpy = "^1.26.1" python-dotenv = "^1.0.0" torch = "^2.2.2" # Issue with torch 2.3.0 and vision models - https://github.com/pytorch/pytorch/issues/121834 ray = "^2.20.0" tqdm = "^4.66.1" tabulate = "^0.9.0" ftfy = "^6.1.1" texify = "^0.1.9" rapidfuzz = "^3.8.1" surya-ocr = "^0.4.8" filetype = "^1.2.0" regex = "^2024.4.28" pdftext = "^0.3.8" grpcio = "^1.63.0" gradio = "^3.36.0" ocrmypdf = "^14.0.2"

[tool.poetry.group.dev.dependencies] jupyter = "^1.0.0"

[tool.poetry.scripts] marker = "convert:main" marker_single = "convert_single:main" marker_chunk_convert = "chunk_convert:main"

[build-system] requires = ["poetry-core"] build-backend = "poetry.core.masonry.api"