Vini2 / phables

🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes
https://phables.readthedocs.io/
MIT License
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[Feature request] Support assembly graphs from any assembler #2

Closed Vini2 closed 1 year ago

Vini2 commented 1 year ago

Is your feature request related to a problem? Please describe. Have to run Hecatomb to get the initial assembly graph file. Cannot provide assembly graphs from other assemblers like metaSPAdes and MEGAHIT directly.

Describe the solution you'd like Provide support to input the assembly graph from any assembler.

Describe alternatives you've considered Take any GFA file as input and work on the unitigs.