[Feature request] Provide BAM files to CoverM

Vini2 / phables

🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes

https://phables.readthedocs.io/

MIT License

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Closed Vini2 closed 1 year ago

Vini2 commented 1 year ago

Is your feature request related to a problem? Please describe. CoverM re-generates BAM files for coverage calculation.

Describe the solution you'd like Use the generated BAM files for CoverM to calculate the coverage e values of untigis.