Your fix would fix the Stan model, but as explained here, I had accidentally uploaded the wrong model.
The repo does now have the correct Stan model file, and the html also shows the correct Stan model.
If you compile the R-Markdown, you should set eval = F in the model block show_group_model, because this will fail if you have not installed pygments at the location "/Users/guidobiele/anaconda/bin/pygmentize".
At the root of the issues you find is, that these are hard to catch if one does not re-fit the models. We did not do this when generating the R-Markdown file, because it would just take too long.
When getting to the ground of this issue, I also thought of a test to catch this type of error, but it's of course a bit late for that.
Hi Sebastian,
apologies for the issues!
Your fix would fix the Stan model, but as explained here, I had accidentally uploaded the wrong model.
The repo does now have the correct Stan model file, and the html also shows the correct Stan model.
If you compile the R-Markdown, you should set
eval = Fin the model blockshow_group_model, because this will fail if you have not installed pygments at the location "/Users/guidobiele/anaconda/bin/pygmentize".At the root of the issues you find is, that these are hard to catch if one does not re-fit the models. We did not do this when generating the R-Markdown file, because it would just take too long. When getting to the ground of this issue, I also thought of a test to catch this type of error, but it's of course a bit late for that.
Guido