VirtualBrainLab / Pinpoint

Multi-probe trajectory planning in an intuitive 3D environment
https://data.virtualbrainlab.org/Pinpoint/
GNU General Public License v3.0
46 stars 4 forks source link

np2.0 quad 3d model #738

Open nsteinme opened 1 month ago

nsteinme commented 1 month ago

Hi Dan, I got ahold of the NP 2.0 Quad models - probe and headstage at these links: probe, hs (though I guess the HS is just for your interest since I'm not sure there is a point of doing anything with it). Hope the ".step" file is a useful format. Could you add this probe as an option for the 'add new probe' menu? Thanks!

dbirman commented 1 month ago

While I'm adding this I might as well add the ultra probe -- it's a 2.0 base right, but do you have the channel map configuration info somewhere?

nsteinme commented 1 month ago

No, Ultra is a 1.0 probe. Here are the x ( https://www.dropbox.com/scl/fi/3828z05b1vg2r9u39zcmw/channels.xcoords.npy?rlkey=b4usowmkulyt2ljnyyugh9c4a&dl=0) and y ( https://www.dropbox.com/scl/fi/vbzx5l7l8k9xujp6v7iaf/channels.ycoords.npy?rlkey=m3ymwlid5t5gjcfm7xttslsh1&dl=0) coordinates of the sites (it's just a 48x8 rectangular grid with 5x5 um sites and 1 um gaps for 6 um center-to-center pitch). Those coordinates relative to the bottom corner of the grid - it would be another ~200 um to the tip as in a normal 1.0 probe.

On Tue, Sep 17, 2024 at 9:14 PM Dan Birman @.***> wrote:

While I'm adding this I might as well add the ultra probe -- it's a 2.0 base right, but do you have the channel map configuration info somewhere?

— Reply to this email directly, view it on GitHub https://github.com/VirtualBrainLab/Pinpoint/issues/738#issuecomment-2357458436, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABZ5IPYISPTLNQTE4WN7J7LZXD43TAVCNFSM6AAAAABOMYZABOVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDGNJXGQ2TQNBTGY . You are receiving this because you authored the thread.Message ID: @.***>

dbirman commented 1 month ago

Perfect, thanks