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VirtualFlyBrain / geppetto-vfb

VFB (v2) application
https://v2.VirtualFlyBrain.org
Other
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Standard Label/Badge colours #654

Closed Robbie1977 closed 4 years ago

Robbie1977 commented 4 years ago

Current label/colour set:

Template #ff6cc8 #ff6cc8 DataSet #b700b5 #b700b5 Anatomy #00a2aa #00a2aa Synaptic_neuropil #00a2aa #00a2aa pub #0164d8 #0164d8 License #0164d8 #0164d8 Person #023f00 #023f00 Neuron #7f2100 #7f2100 Neuron_projection_bundle #d6007d #d6007d Ganglion #d6007d #d6007d Neuromere #d6007d #d6007d GABAergic #9551ff #9551ff Dopaminergic #9551ff #9551ff Cholinergic #9551ff #9551ff Glutamatergic #9551ff #9551ff Octopaminergic #9551ff #9551ff Serotonergic #9551ff #9551ff Motor_neuron #ff6a3a #ff6a3a Sensory_neuron #ff6a3a #ff6a3a Peptidergic_neuron #ff6a3a #ff6a3a Glial_cell #ff6a3a #ff6a3a Cell #ff6a3a #ff6a3a Clone #d6007d #d6007d Property #005f1d #005f1d Resource #005f1d #005f1d Site #005f1d #005f1d Expression_pattern #534700 #534700 Split #e012e3 #e012e3

Robbie1977 commented 4 years ago

All current PDB labels for ref:

API
Adult
Anatomy
Cell
Cholinergic
Class
Clone
Cluster
DataSet
Dopaminergic
Entity
Expression_pattern
FBBI
FBCV
FBDV
Feature
GABAergic
GENO
Ganglion
Glial_cell
Glutamatergic
Individual
Larval
Leaf_node
License
Motor_neuron
NBLAST
Nervous_system
Neuroblast
Neuromere
Neuron
Neuron_projection_bundle
Obsolete
Octopaminergic
Painted_domain
Peptidergic_neuron
Person
Property
RO
Resource
Root
SO
Sense_organ
Sensory_neuron
Serotonergic
Site
Split
Synaptic_neuropil
Synaptic_neuropil_block
Synaptic_neuropil_domain
Synaptic_neuropil_subdomain
Template
VFB
_Class
_Individual
_Property
pub
dosumis commented 4 years ago

For (current) circuit browser purposes we only care about labels of nodes that have the label :Neuron

Robbie1977 commented 4 years ago

In which case we only care about:


[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Anatomy, Cell, Entity, Larval]
--
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Anatomy, Cell, Entity]
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Anatomy, Cell, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Entity]
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Anatomy, Cell, Serotonergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Serotonergic, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Serotonergic, Entity]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Serotonergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Anatomy, Cell, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, Entity]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, GABAergic, Entity]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Glutamatergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, GABAergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Glutamatergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Dopaminergic, Entity]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Octopaminergic, Entity]
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Anatomy, Cell, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Dopaminergic, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Motor_neuron, Anatomy, Cell, Entity]
[Class, VFB, _Class, Neuron, Nervous_system, Motor_neuron, Anatomy, Cell, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Motor_neuron, Anatomy, Cell, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Serotonergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, GABAergic, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, GABAergic, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Cholinergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Glutamatergic, Entity]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Entity]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Octopaminergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Entity, Leaf_node]
[Class, VFB, _Class, Neuron, Nervous_system, Motor_neuron, Anatomy, Cell, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Glutamatergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Glutamatergic, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Dopaminergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, GABAergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Anatomy, Cell, Cholinergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, GABAergic, Octopaminergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Anatomy, Cell, Entity]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Serotonergic, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Motor_neuron, Anatomy, Cell, Glutamatergic, Octopaminergic, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Octopaminergic, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Octopaminergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Anatomy, Cell, Cholinergic, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Dopaminergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Dopaminergic, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Motor_neuron, Anatomy, Cell, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Dopaminergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, GABAergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Motor_neuron, Anatomy, Cell, Glutamatergic, Octopaminergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Glutamatergic, GABAergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Glutamatergic, Entity, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Cholinergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Motor_neuron, Peptidergic_neuron, Anatomy, Cell, Glutamatergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Glutamatergic, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Dopaminergic, Serotonergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, Glutamatergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, Glutamatergic, Entity, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Octopaminergic, Entity, Larval]
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Anatomy, Cell, Cholinergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Entity, Leaf_node]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Glutamatergic, Entity, Leaf_node, Larval]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, GABAergic, Entity, Adult]
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Entity, Adult]
[Class, VFB, _Class, Neuron, Sensory_neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Anatomy, Cell, Cholinergic, Glutamatergic, Entity, Leaf_node, Adult]
[Class, VFB, _Class, Neuron, Nervous_system, Peptidergic_neuron, Anatomy, Cell, Serotonergic, Entity, Leaf_node, Adult]
[Individual, VFB, _Individual, NBLAST, Neuron, Anatomy, Cell, Entity]
[Individual, VFB, _Individual, NBLAST, Neuron, Anatomy, Cell, Dopaminergic, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, Entity]
[Individual, VFB, _Individual, NBLAST, Neuron, Anatomy, Cell, GABAergic, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, Cholinergic, Entity]
[Individual, VFB, _Individual, Neuron, Sensory_neuron, Anatomy, Cell, Cholinergic, Entity]
[Individual, VFB, _Individual, Neuron, Peptidergic_neuron, Anatomy, Cell, Entity]
[Individual, VFB, _Individual, Neuron, Sensory_neuron, Anatomy, Cell, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, Cholinergic, Glutamatergic, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, Glutamatergic, Entity]
[Individual, VFB, _Individual, NBLAST, Neuron, Anatomy, Cell, Cholinergic, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, GABAergic, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, Serotonergic, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, Octopaminergic, Entity]
[Individual, VFB, _Individual, NBLAST, Neuron, Anatomy, Cell, Glutamatergic, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, Cholinergic, GABAergic, Entity]
[Individual, VFB, _Individual, Neuron, Peptidergic_neuron, Anatomy, Cell, Cholinergic, Entity]
[Individual, VFB, _Individual, Neuron, Motor_neuron, Anatomy, Cell, Entity]
[Individual, VFB, _Individual, Neuron, Peptidergic_neuron, Anatomy, Cell, Dopaminergic, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, Painted_domain, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, GABAergic, Octopaminergic, Entity]
[Individual, VFB, _Individual, NBLAST, Neuron, Anatomy, Cell, Serotonergic, Entity]
[Individual, VFB, _Individual, Neuron, Anatomy, Cell, Dopaminergic, Entity]
[Individual, VFB, _Individual, Neuron, Sensory_neuron, Peptidergic_neuron, Anatomy, Cell, Entity]
[Individual, VFB, _Individual, Neuron, Peptidergic_neuron, Anatomy, Cell, Glutamatergic, Entity]
[Individual, Neuron, Sensory_neuron, Anatomy, Cell, Entity]
[Individual, Neuron, Anatomy, Cell, Entity]
[Individual, Neuron, Anatomy, Cell, Dopaminergic, Entity]
[Individual, Neuron, Motor_neuron, Anatomy, Cell, Entity]
[Individual, Neuron, Peptidergic_neuron, Anatomy, Cell, Entity]
[Individual, Neuron, Anatomy, Cell, Serotonergic, Entity]
[Individual, Neuron, Sensory_neuron, Peptidergic_neuron, Anatomy, Cell, Entity]
[Individual, Neuron, Sensory_neuron, Anatomy, Cell, Cholinergic, Entity]
[Individual, Neuron, Anatomy, Cell, Glutamatergic, Entity]
[Individual, Neuron, Anatomy, Cell, Cholinergic, Entity]
[Individual, Neuron, Anatomy, Cell, Cholinergic, GABAergic, Entity]
[Individual, Neuron, Anatomy, Cell, GABAergic, Entity]
[Individual, Neuron, Anatomy, Cell, GABAergic, Octopaminergic, Entity]
[Individual, Neuron, Peptidergic_neuron, Anatomy, Cell, Cholinergic, Entity]
[Individual, Neuron, Anatomy, Cell, Octopaminergic, Entity]
[Individual, Neuron, Sensory_neuron, Anatomy, Cell, Serotonergic, Entity]
[Individual, Neuron, Anatomy, Cell, Glutamatergic, GABAergic, Entity]
[Individual, Neuron, Peptidergic_neuron, Anatomy, Cell, Dopaminergic, Entity]
[Individual, Neuron, Motor_neuron, Peptidergic_neuron, Anatomy, Cell, Glutamatergic, Entity]
[Individual, Neuron, Peptidergic_neuron, Anatomy, Cell, Glutamatergic, Entity]
[Individual, Neuron, Motor_neuron, Anatomy, Cell, Glutamatergic, Octopaminergic, Entity]
[Individual, Neuron, Anatomy, Cell, Cholinergic, Glutamatergic, Entity]
[Individual, Neuron, Peptidergic_neuron, Anatomy, Cell, Serotonergic, Entity]