Include preferred roots in PDB

VirtualFlyBrain / neo4j2owl

Semantics preserving mapping of OWL 2 EL and Neo4J. Under development, do not use.

Apache License 2.0

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Include preferred roots in PDB #37

Closed dosumis closed 4 years ago

dosumis commented 4 years ago

It would be very useful to have preferred roots tagged in pdb. Unfortunately, this not currently present - presumably due this being recorded as an annotation axiom on the ontology.

Perhaps too much of a stretch to get this in - but very useful for removing abstract classes from graph/tree views.

matentzn commented 4 years ago

Can you explain this a bit more? What is a preferred root?

matentzn commented 4 years ago

Ah now I see

matentzn commented 4 years ago

Hmmm interesting I will see what I can do. Maybe this is actually easy, however adding that to the importer is a bit of overkill. Let me think about it though.

matentzn commented 4 years ago

The pipeline now generated nodeLabel annotations for all preferred root terms, which will result in all those nodes getting a neo4j node label preferred_root.