VirtualFlyBrain / pipeline

A repository for amalgamating pipeline issue tickets and general VFB pipeline doc
https://hub.docker.com/repository/docker/virtualflybrain/pipeline
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Add centre points and domain IDs to channel individuals in KB #2

Open dosumis opened 6 years ago

dosumis commented 6 years ago

@dosumis commented on Sat Nov 11 2017

This should probably be rephrased as a developer story or user story:

As a user viewing sections of a stack with little or no staining, I want to re-centre the stack browser in order to view relevant (brightest/central) sections for a specific entity (painted domain, expression pattern, neuron etc)

As a front end developer I want to pull all relevant information about an image from a single source in order to efficiently drive display and manipulation of that domain on the site.

Relevant mapping tables for adult brain domains: https://github.com/VirtualFlyBrain/DrosAdultBRAINdomains/blob/master/refData/LRmerged_Index.tx https://github.com/VirtualFlyBrain/DrosAdultHalfBRAINdomains/blob/master/refData/neuropil_domain_data.tsv https://github.com/VirtualFlyBrain/DrosAdultHalfBRAINdomains/blob/master/refData/neuropil_domain_data.tsv

Brightest slice for FlyCircuit neurons: https://gist.github.com/jefferis/9411291

dosumis commented 6 years ago

Supersedes: https://github.com/VirtualFlyBrain/Management/issues/20