when I run EvaluateSegmentation -help, I do not see the full help message. i did some debugging and the problem is related to the for loop referenced below:
in other words, the following section is not shown in the help message:
-default or -def =reads default options from a file default.txt in the current folder. All the options above except image filenames can be used as defaults. Default options are overridden by options given in the command line.
Example:
/usr/local/bin/EvaluateSegmentation groundtruth.nii segment.nii -use RNDIND,HDRFDST@0.96@,FMEASR@0.5@ -xml result.xml
2)For help on evaluation of landmark, type: /usr/local/bin/EvaluateSegmentation -loc
3)For help on lesion detection evaluation, type: /usr/local/bin/EvaluateSegmentation -det
---** VISCERAL 2013, www.visceral.eu **---
i was able to fix it with the following, but this isn't a true fix, because there must be an underlying issue somewhere else.
if (i == (METRIC_COUNT-1)) {
break;
}
previous versions of this tool did not have this issue (for example, the earlier builds in the builds directory). But the most recent Ubuntu build does have this problem.
i don't know c/c++, so i'm afraid i can't help much with debugging further.
when I run
EvaluateSegmentation -help, I do not see the full help message. i did some debugging and the problem is related to the for loop referenced below:https://github.com/Visceral-Project/EvaluateSegmentation/blob/a10b393ab01ead32087e535b8b3ea1ed63217efb/source/EvaluateSegmentation.cxx#L64-L68
in other words, the following section is not shown in the help message:
i was able to fix it with the following, but this isn't a true fix, because there must be an underlying issue somewhere else.
previous versions of this tool did not have this issue (for example, the earlier builds in the
buildsdirectory). But the most recent Ubuntu build does have this problem.i don't know c/c++, so i'm afraid i can't help much with debugging further.