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VisualDataWeb / WebVOWL

Visualizing ontologies on the Web
http://vowl.visualdataweb.org/webvowl.html
MIT License
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Running via Docker instructions from the README.md do not work. #203

Open jk89 opened 1 month ago

jk89 commented 1 month ago

Steps tried:

  1. cd to/webowl/dir
  2. docker build . -t webvowl:v1
  3. docker-compose up -d
  4. Visit http://localhost:8080/

What I expected to happend:

Some usable web interface.

What actually occured:

Type Status Report

Message Not found

Description The origin server did not find a current representation for the target resource or is not willing to disclose that one exists.

Apache Tomcat/9.0.20

Container error from docker logs :

docker logs 3629dc1dca77
16-Jul-2024 15:33:36.588 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version name:   Apache Tomcat/9.0.20
16-Jul-2024 15:33:36.590 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server built:          May 3 2019 22:26:00 UTC
16-Jul-2024 15:33:36.590 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version number: 9.0.20.0
16-Jul-2024 15:33:36.590 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name:               Linux
16-Jul-2024 15:33:36.590 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version:            6.5.0-41-generic
16-Jul-2024 15:33:36.590 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture:          amd64
16-Jul-2024 15:33:36.591 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home:             /usr/lib/jvm/java-1.8-openjdk/jre
16-Jul-2024 15:33:36.591 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version:           1.8.0_212-b04
16-Jul-2024 15:33:36.591 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor:            IcedTea
16-Jul-2024 15:33:36.591 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE:         /usr/local/tomcat
16-Jul-2024 15:33:36.591 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME:         /usr/local/tomcat
16-Jul-2024 15:33:36.592 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/usr/local/tomcat/conf/logging.properties
16-Jul-2024 15:33:36.592 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dorg.apache.catalina.security.SecurityListener.UMASK=0027
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dignore.endorsed.dirs=
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/usr/local/tomcat
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/usr/local/tomcat
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/usr/local/tomcat/temp
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent Loaded APR based Apache Tomcat Native library [1.2.21] using APR version [1.6.5].
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent APR capabilities: IPv6 [true], sendfile [true], accept filters [false], random [true].
16-Jul-2024 15:33:36.593 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent APR/OpenSSL configuration: useAprConnector [false], useOpenSSL [true]
16-Jul-2024 15:33:36.596 INFO [main] org.apache.catalina.core.AprLifecycleListener.initializeSSL OpenSSL successfully initialized [OpenSSL 1.1.1b  26 Feb 2019]
16-Jul-2024 15:33:36.825 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"]
16-Jul-2024 15:33:36.843 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["ajp-nio-8009"]
16-Jul-2024 15:33:36.845 INFO [main] org.apache.catalina.startup.Catalina.load Server initialization in [414] milliseconds
16-Jul-2024 15:33:36.865 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service [Catalina]
16-Jul-2024 15:33:36.865 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet engine: [Apache Tomcat/9.0.20]
16-Jul-2024 15:33:36.883 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deploying web application archive [/usr/local/tomcat/webapps/ROOT.war]
16-Jul-2024 15:33:36.903 SEVERE [main] org.apache.catalina.startup.ContextConfig.beforeStart Exception fixing docBase for context []
        java.util.zip.ZipException: error in opening zip file
                at java.util.zip.ZipFile.open(Native Method)
                at java.util.zip.ZipFile.<init>(ZipFile.java:225)
                at java.util.zip.ZipFile.<init>(ZipFile.java:155)
                at java.util.jar.JarFile.<init>(JarFile.java:166)
                at java.util.jar.JarFile.<init>(JarFile.java:103)
                at sun.net.www.protocol.jar.URLJarFile.<init>(URLJarFile.java:93)
                at sun.net.www.protocol.jar.URLJarFile.getJarFile(URLJarFile.java:69)
                at sun.net.www.protocol.jar.JarFileFactory.get(JarFileFactory.java:99)
                at sun.net.www.protocol.jar.JarURLConnection.connect(JarURLConnection.java:122)
                at sun.net.www.protocol.jar.JarURLConnection.getJarFile(JarURLConnection.java:89)
                at org.apache.catalina.startup.ExpandWar.expand(ExpandWar.java:130)
                at org.apache.catalina.startup.ContextConfig.fixDocBase(ContextConfig.java:615)
                at org.apache.catalina.startup.ContextConfig.beforeStart(ContextConfig.java:748)
                at org.apache.catalina.startup.ContextConfig.lifecycleEvent(ContextConfig.java:303)
                at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:123)
                at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:423)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:182)
                at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:713)
                at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:690)
                at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:705)
                at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:978)
                at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1849)
                at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
                at java.util.concurrent.FutureTask.run(FutureTask.java:266)
                at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
                at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:112)
                at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:773)
                at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:427)
                at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1576)
                at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:309)
                at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:123)
                at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:423)
                at org.apache.catalina.util.LifecycleBase.setState(LifecycleBase.java:366)
                at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:929)
                at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:841)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1377)
                at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1367)
                at java.util.concurrent.FutureTask.run(FutureTask.java:266)
                at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
                at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:134)
                at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:902)
                at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:262)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardService.startInternal(StandardService.java:421)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:932)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.startup.Catalina.start(Catalina.java:633)
                at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
                at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
                at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
                at java.lang.reflect.Method.invoke(Method.java:498)
                at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:344)
                at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:475)
16-Jul-2024 15:33:36.917 SEVERE [main] org.apache.catalina.startup.HostConfig.deployWAR Error deploying web application archive [/usr/local/tomcat/webapps/ROOT.war]
        java.lang.IllegalStateException: Error starting child
                at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:716)
                at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:690)
                at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:705)
                at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:978)
                at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1849)
                at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
                at java.util.concurrent.FutureTask.run(FutureTask.java:266)
                at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
                at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:112)
                at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:773)
                at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:427)
                at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1576)
                at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:309)
                at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:123)
                at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:423)
                at org.apache.catalina.util.LifecycleBase.setState(LifecycleBase.java:366)
                at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:929)
                at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:841)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1377)
                at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1367)
                at java.util.concurrent.FutureTask.run(FutureTask.java:266)
                at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
                at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:134)
                at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:902)
                at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:262)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardService.startInternal(StandardService.java:421)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:932)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.startup.Catalina.start(Catalina.java:633)
                at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
                at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
                at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
                at java.lang.reflect.Method.invoke(Method.java:498)
                at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:344)
                at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:475)
        Caused by: org.apache.catalina.LifecycleException: Failed to initialize component [org.apache.catalina.webresources.WarResourceSet@10dba097]
                at org.apache.catalina.util.LifecycleBase.handleSubClassException(LifecycleBase.java:440)
                at org.apache.catalina.util.LifecycleBase.init(LifecycleBase.java:139)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:173)
                at org.apache.catalina.webresources.StandardRoot.startInternal(StandardRoot.java:714)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardContext.resourcesStart(StandardContext.java:4797)
                at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:4932)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:713)
                ... 37 more
        Caused by: java.lang.IllegalArgumentException: java.util.zip.ZipException: error in opening zip file
                at org.apache.catalina.webresources.AbstractSingleArchiveResourceSet.initInternal(AbstractSingleArchiveResourceSet.java:143)
                at org.apache.catalina.util.LifecycleBase.init(LifecycleBase.java:136)
                ... 44 more
        Caused by: java.util.zip.ZipException: error in opening zip file
                at java.util.zip.ZipFile.open(Native Method)
                at java.util.zip.ZipFile.<init>(ZipFile.java:225)
                at java.util.zip.ZipFile.<init>(ZipFile.java:155)
                at java.util.jar.JarFile.<init>(JarFile.java:166)
                at java.util.jar.JarFile.<init>(JarFile.java:130)
                at org.apache.tomcat.util.compat.JreCompat.jarFileNewInstance(JreCompat.java:164)
                at org.apache.tomcat.util.compat.JreCompat.jarFileNewInstance(JreCompat.java:149)
                at org.apache.catalina.webresources.AbstractSingleArchiveResourceSet.initInternal(AbstractSingleArchiveResourceSet.java:140)
                ... 45 more
16-Jul-2024 15:33:36.919 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deployment of web application archive [/usr/local/tomcat/webapps/ROOT.war] has finished in [35] ms
16-Jul-2024 15:33:36.921 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8080"]
16-Jul-2024 15:33:36.927 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["ajp-nio-8009"]
16-Jul-2024 15:33:36.928 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in [82] milliseconds
16-Jul-2024 15:37:23.717 INFO [Thread-5] org.apache.coyote.AbstractProtocol.pause Pausing ProtocolHandler ["http-nio-8080"]
16-Jul-2024 15:37:23.726 INFO [Thread-5] org.apache.coyote.AbstractProtocol.pause Pausing ProtocolHandler ["ajp-nio-8009"]
16-Jul-2024 15:37:23.731 INFO [Thread-5] org.apache.catalina.core.StandardService.stopInternal Stopping service [Catalina]
16-Jul-2024 15:37:23.732 INFO [Thread-5] org.apache.coyote.AbstractProtocol.stop Stopping ProtocolHandler ["http-nio-8080"]
16-Jul-2024 15:37:23.732 INFO [Thread-5] org.apache.coyote.AbstractProtocol.stop Stopping ProtocolHandler ["ajp-nio-8009"]
16-Jul-2024 15:37:23.733 INFO [Thread-5] org.apache.coyote.AbstractProtocol.destroy Destroying ProtocolHandler ["http-nio-8080"]
16-Jul-2024 15:37:23.733 INFO [Thread-5] org.apache.coyote.AbstractProtocol.destroy Destroying ProtocolHandler ["ajp-nio-8009"]
16-Jul-2024 15:38:46.961 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version name:   Apache Tomcat/9.0.20
16-Jul-2024 15:38:46.962 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server built:          May 3 2019 22:26:00 UTC
16-Jul-2024 15:38:46.962 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version number: 9.0.20.0
16-Jul-2024 15:38:46.962 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name:               Linux
16-Jul-2024 15:38:46.962 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version:            6.5.0-41-generic
16-Jul-2024 15:38:46.962 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture:          amd64
16-Jul-2024 15:38:46.962 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home:             /usr/lib/jvm/java-1.8-openjdk/jre
16-Jul-2024 15:38:46.962 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version:           1.8.0_212-b04
16-Jul-2024 15:38:46.962 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor:            IcedTea
16-Jul-2024 15:38:46.963 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE:         /usr/local/tomcat
16-Jul-2024 15:38:46.963 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME:         /usr/local/tomcat
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/usr/local/tomcat/conf/logging.properties
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dorg.apache.catalina.security.SecurityListener.UMASK=0027
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dignore.endorsed.dirs=
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/usr/local/tomcat
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/usr/local/tomcat
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/usr/local/tomcat/temp
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent Loaded APR based Apache Tomcat Native library [1.2.21] using APR version [1.6.5].
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent APR capabilities: IPv6 [true], sendfile [true], accept filters [false], random [true].
16-Jul-2024 15:38:46.964 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent APR/OpenSSL configuration: useAprConnector [false], useOpenSSL [true]
16-Jul-2024 15:38:46.966 INFO [main] org.apache.catalina.core.AprLifecycleListener.initializeSSL OpenSSL successfully initialized [OpenSSL 1.1.1b  26 Feb 2019]
16-Jul-2024 15:38:47.120 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"]
16-Jul-2024 15:38:47.134 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["ajp-nio-8009"]
16-Jul-2024 15:38:47.135 INFO [main] org.apache.catalina.startup.Catalina.load Server initialization in [282] milliseconds
16-Jul-2024 15:38:47.150 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service [Catalina]
16-Jul-2024 15:38:47.150 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet engine: [Apache Tomcat/9.0.20]
16-Jul-2024 15:38:47.162 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deploying web application archive [/usr/local/tomcat/webapps/ROOT.war]
16-Jul-2024 15:38:47.175 SEVERE [main] org.apache.catalina.startup.ContextConfig.beforeStart Exception fixing docBase for context []
        java.util.zip.ZipException: error in opening zip file
                at java.util.zip.ZipFile.open(Native Method)
                at java.util.zip.ZipFile.<init>(ZipFile.java:225)
                at java.util.zip.ZipFile.<init>(ZipFile.java:155)
                at java.util.jar.JarFile.<init>(JarFile.java:166)
                at java.util.jar.JarFile.<init>(JarFile.java:103)
                at sun.net.www.protocol.jar.URLJarFile.<init>(URLJarFile.java:93)
                at sun.net.www.protocol.jar.URLJarFile.getJarFile(URLJarFile.java:69)
                at sun.net.www.protocol.jar.JarFileFactory.get(JarFileFactory.java:99)
                at sun.net.www.protocol.jar.JarURLConnection.connect(JarURLConnection.java:122)
                at sun.net.www.protocol.jar.JarURLConnection.getJarFile(JarURLConnection.java:89)
                at org.apache.catalina.startup.ExpandWar.expand(ExpandWar.java:130)
                at org.apache.catalina.startup.ContextConfig.fixDocBase(ContextConfig.java:615)
                at org.apache.catalina.startup.ContextConfig.beforeStart(ContextConfig.java:748)
                at org.apache.catalina.startup.ContextConfig.lifecycleEvent(ContextConfig.java:303)
                at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:123)
                at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:423)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:182)
                at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:713)
                at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:690)
                at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:705)
                at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:978)
                at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1849)
                at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
                at java.util.concurrent.FutureTask.run(FutureTask.java:266)
                at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
                at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:112)
                at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:773)
                at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:427)
                at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1576)
                at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:309)
                at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:123)
                at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:423)
                at org.apache.catalina.util.LifecycleBase.setState(LifecycleBase.java:366)
                at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:929)
                at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:841)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1377)
                at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1367)
                at java.util.concurrent.FutureTask.run(FutureTask.java:266)
                at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
                at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:134)
                at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:902)
                at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:262)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardService.startInternal(StandardService.java:421)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:932)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.startup.Catalina.start(Catalina.java:633)
                at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
                at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
                at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
                at java.lang.reflect.Method.invoke(Method.java:498)
                at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:344)
                at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:475)
16-Jul-2024 15:38:47.184 SEVERE [main] org.apache.catalina.startup.HostConfig.deployWAR Error deploying web application archive [/usr/local/tomcat/webapps/ROOT.war]
        java.lang.IllegalStateException: Error starting child
                at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:716)
                at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:690)
                at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:705)
                at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:978)
                at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1849)
                at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
                at java.util.concurrent.FutureTask.run(FutureTask.java:266)
                at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
                at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:112)
                at org.apache.catalina.startup.HostConfig.deployWARs(HostConfig.java:773)
                at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:427)
                at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1576)
                at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:309)
                at org.apache.catalina.util.LifecycleBase.fireLifecycleEvent(LifecycleBase.java:123)
                at org.apache.catalina.util.LifecycleBase.setStateInternal(LifecycleBase.java:423)
                at org.apache.catalina.util.LifecycleBase.setState(LifecycleBase.java:366)
                at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:929)
                at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:841)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1377)
                at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1367)
                at java.util.concurrent.FutureTask.run(FutureTask.java:266)
                at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
                at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:134)
                at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:902)
                at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:262)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardService.startInternal(StandardService.java:421)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:932)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.startup.Catalina.start(Catalina.java:633)
                at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
                at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
                at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
                at java.lang.reflect.Method.invoke(Method.java:498)
                at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:344)
                at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:475)
        Caused by: org.apache.catalina.LifecycleException: Failed to initialize component [org.apache.catalina.webresources.WarResourceSet@1786f9d5]
                at org.apache.catalina.util.LifecycleBase.handleSubClassException(LifecycleBase.java:440)
                at org.apache.catalina.util.LifecycleBase.init(LifecycleBase.java:139)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:173)
                at org.apache.catalina.webresources.StandardRoot.startInternal(StandardRoot.java:714)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.StandardContext.resourcesStart(StandardContext.java:4797)
                at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:4932)
                at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
                at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:713)
                ... 37 more
        Caused by: java.lang.IllegalArgumentException: java.util.zip.ZipException: error in opening zip file
                at org.apache.catalina.webresources.AbstractSingleArchiveResourceSet.initInternal(AbstractSingleArchiveResourceSet.java:143)
                at org.apache.catalina.util.LifecycleBase.init(LifecycleBase.java:136)
                ... 44 more
        Caused by: java.util.zip.ZipException: error in opening zip file
                at java.util.zip.ZipFile.open(Native Method)
                at java.util.zip.ZipFile.<init>(ZipFile.java:225)
                at java.util.zip.ZipFile.<init>(ZipFile.java:155)
                at java.util.jar.JarFile.<init>(JarFile.java:166)
                at java.util.jar.JarFile.<init>(JarFile.java:130)
                at org.apache.tomcat.util.compat.JreCompat.jarFileNewInstance(JreCompat.java:164)
                at org.apache.tomcat.util.compat.JreCompat.jarFileNewInstance(JreCompat.java:149)
                at org.apache.catalina.webresources.AbstractSingleArchiveResourceSet.initInternal(AbstractSingleArchiveResourceSet.java:140)
                ... 45 more
16-Jul-2024 15:38:47.185 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deployment of web application archive [/usr/local/tomcat/webapps/ROOT.war] has finished in [22] ms
16-Jul-2024 15:38:47.186 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8080"]
16-Jul-2024 15:38:47.190 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["ajp-nio-8009"]
16-Jul-2024 15:38:47.191 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in [55] milliseconds
Dr0p42 commented 1 month ago

Same issue here, by looking at the Dockerfile it's trying to download a war file from http://vowl.visualdataweb.org/downloads/webvowl_1.1.7.war but this URL is now returning an html which is why, I guess, it not working.

Dr0p42 commented 1 month ago

@jk89 if you want to run it locally, you can change the Dockerfile to be 

###########
# WebVOWL #
###########

# Use tomcat java 8 alpine as base image
FROM tomcat:9-jre8-alpine

# Build time arguments (WebVOWL version)
ARG version=1.1.7

# Download WebVOWL to tomcat webapps directory as root app
RUN rm -rf /usr/local/tomcat/webapps/* && \
    wget -O /usr/local/tomcat/webapps/ROOT.war https://github.com/DrSnowbird/WebVOWL-docker/raw/master/webvowl_1.1.7.war

# Run default server
CMD ["catalina.sh", "run"]

Thank you @DrSnowbird for pushing the WAR file in your fork :)

Dr0p42 commented 1 month ago

I built a new Docker container and pushed it on docker hub, you can run the editor version by running the following:

docker run --rm -it -p 8080:8000 jupyternaas/webvowl:editor

And then go on http://localhost:8080