I have no idea why this only came up in our case and how this is triggered but compared to the other log statements in your code, this line looked different. I could not test it yet, though.
Error:
<simpleError in getOption("MSstatsLog")("MSstats - groupComparisonPlots function"): attempt to apply non-function>
I have no idea why this only came up in our case and how this is triggered but compared to the other log statements in your code, this line looked different. I could not test it yet, though.
Error:
<simpleError in getOption("MSstatsLog")("MSstats - groupComparisonPlots function"): attempt to apply non-function>