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WGLab / CancerVar

Clinical interpretation of somatic mutations in cancer
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Invalid parameter in configuration file #19

Open user-tq opened 1 year ago

user-tq commented 1 year ago 
# the database location/dir from annnovar   check if database file exists
database_names = refGene esp6500siv2_all 1000g2015aug avsnp147 dbnsfp30a clinvar_20221030 exac03 dbscsnv11 dbnsfp31a_interpro ensGene knownGene cosmic91 icgc28 gnomad_genome

update the database，clinvar_20190305 to clinvar_20221030，run

python  CancerVar.py -c config.ini

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