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WGLab / InterVar

A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline
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MemoryError #18

Closed mimranmani closed 6 years ago

mimranmani commented 7 years ago

Hi I am getting this error when I am running the program with and without the annovar

Traceback (most recent call last): File "Intervar.py", line 2051, in main() File "Intervar.py", line 2013, in main read_datasets() File "Intervar.py", line 364, in read_datasets BS2_snps_recess_dict[ keys ]=cls2[4] # key as snp info MemoryError

quanliustc commented 7 years ago

This dataset has about 5,671,385 records, not very big, What's your version of python? Are you using InterVar in Windows or Linux? 32 or 64 bit?