I'm receiving the following error:
Traceback (most recent call last):
File "/home/lkmack/.conda/envs/liqa_env/lib/python3.11/site-packages/liqa_src/quantify.py", line 208, in
exonIndicators[isoformNames[j]][i-1] = int(tmpExonIndicators[j])
^^^^^^^^^^^^^^^^^^^^^^^^^
ValueError: invalid literal for int() with base 10: 'AAEL009430-RF'
Is this indicating an issue with the .refgene file or my BAM file?
I'm receiving the following error: Traceback (most recent call last): File "/home/lkmack/.conda/envs/liqa_env/lib/python3.11/site-packages/liqa_src/quantify.py", line 208, in
exonIndicators[isoformNames[j]][i-1] = int(tmpExonIndicators[j])
^^^^^^^^^^^^^^^^^^^^^^^^^
ValueError: invalid literal for int() with base 10: 'AAEL009430-RF'
Is this indicating an issue with the .refgene file or my BAM file?