WGLab LongGF issues - Githubissues

WGLab / LongGF

A computational algorithm and software tool for fast and accurate detection of gene fusion by long-read transcriptome sequencing

GNU General Public License v3.0

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issues

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no fusions produced seem result from issues with different gtf file format

#19 johnlin89 opened 5 months ago
2
Tandem Duplications/Fusion of the same gene?

#18 Jungal10 closed 8 months ago
1
gene pair ordering problem

#17 qinqian opened 1 year ago
2
pacbio read pre-processing

#16 gr8ape opened 2 years ago
2
Simulated fusion not detected

#15 iskandr opened 2 years ago
2
the tools used for alignment

#14 q1134269149 opened 2 years ago
1
Error in returning known fusions

#13 basilahmad01 opened 3 years ago
15
Error : not equal for 65:1178|8579b281-d6ac-4602-a460-bbbac1ac52b4 2=0

#12 ShawnSimp opened 3 years ago
3
Error on installation

#11 parsboy66 opened 3 years ago
10
Is there any way to output the read sequence that support the gene fusion?

#10 zhxiaokang opened 3 years ago
9
Github version won't compile

#9 Lux91 closed 3 years ago
6
Does LongGF ignore contigs in the reference not prefixed with "chr"?

#8 oneillkza opened 3 years ago
2
[Question] Tuning minimap2 for chimeric reads

#7 majorkazer closed 3 years ago
6
the result meaning?

#6 pl618 opened 3 years ago
3
How to get the BEDPE format result ?

#5 pl618 closed 3 years ago
0
'std::out_of_range' error

#4 dolittle007 closed 3 years ago
6
No fusion was found Finish _fg_cand[_gene_pair=0

#3 lane-zhao closed 3 years ago
22
Update README.md

#2 fangli80 closed 4 years ago
1
terminate called after throwing an instance of 'std::out_of_range'

#1 fangli80 closed 4 years ago
1