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WGLab / LongReadSum

MIT License
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No outputs for FAST5, sequencing_summary.txt #13

Closed jonperdomo closed 2 years ago

jonperdomo commented 2 years ago

No output is generated for FAST5 files containing single or multiple datasets:

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jonperdomo commented 2 years ago

I also tried using the sequencing_summary.txt file as the input with the same result. This file produces results with PycoQC and MinIONQC so it does not appear to be an issue with the file:

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liuqianhn commented 2 years ago

@jonperdomo sequencing_summary.txt might be different for various basecallers. Please check the format (sequencing_summary.txt) with the code to see how to improve it.

jonperdomo commented 2 years ago

Unthreaded implementation is complete.