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WGLab / PennCNV

Copy number vaiation detection from SNP arrays
http://penncnv.openbioinformatics.org
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compile_pfb.pl issue #119

Closed taeiseul closed 6 months ago

taeiseul commented 6 months ago

I'm trying to create a pfb file, but I encountered following question: Error: invalid header line in signalfile C:\Users\12063\Desktop\PennCNV\input\206664610063_R01C01 .txt (B Allele Freq expected): <Name Chr Position 206664610063_R01C01.GType 206664610063_R01C01.Log.R.Ratio 206664610063_R01C01.B.Allele.Freq> at compile_pfb.pl line 77 the listfile is as below: C:\Users\12063\Desktop\PennCNV\input\206664610063_R01C01 .txt C:\Users\12063\Desktop\PennCNV\input\206664610063_R01C02 .txt C:\Users\12063\Desktop\PennCNV\input\206664610063_R02C01 .txt C:\Users\12063\Desktop\PennCNV\input\206664610063_R02C02 .txt


the command line is:
~perl compile_pfb.pl -listfile input_list_file.txt -output out.pfb