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WGLab / PennCNV

Copy number vaiation detection from SNP arrays
http://penncnv.openbioinformatics.org
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How can i get Hmm file for affy500k array #73

Open zhangjsyeah opened 2 years ago

zhangjsyeah commented 2 years ago

Dear Dr.Wang I'm progressing the CNV analysis through PennCNV-Affy, but there is one problem. When i downloaded PennCNV package, cann't find out hmm file for 500k how can i get the hmm file for affy500k array? Could I use affygw6.hmm to analyze 500k array? Best wish jiashuo Zhang

kaichop commented 2 years ago

Yes this should work fine. -Kai

On Wed, Sep 22, 2021 at 9:14 PM zhangjsyeah @.***> wrote:

Dear Dr.Wang I'm progressing the CNV analysis through PennCNV-Affy, but there is one problem. When i downloaded PennCNV package, cann't find out hmm file for 500k how can i get the hmm file for affy500k array? Could I use affygw6.hmm to analyze 500k array? Best wish jiashuo Zhang

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