WGLab / RepeatHMM

a hidden Markov model to infer simple repeats from genome sequences
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example data for testing the tool #34

Open kaichop opened 3 years ago

kaichop commented 3 years ago

The usage example "atxn3_data/rawdata/sam025.raw.fastq" is not present in the github repository, so users cannot easily test how to use the tool and generate results or figures.

The RepeatHMM-scan usage example for whole-genome repeat scan needs to be added.

liuqianhn commented 3 years ago

This usage example has been improved, and RepeatHMM-scan help is also provided. Several other issues are also fixed. The new version is released to reflected those changes.