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WGLab / RepeatHMM

a hidden Markov model to infer simple repeats from genome sequences
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Result #38

Closed woodoo46 closed 3 years ago

woodoo46 commented 3 years ago

Just want to confirm my understanding of the output:

chr1_297538_297674_ta 0/0: this means that it is possible that the sample does not have repeat unit in this region? chr1_370612_370656_ttttc 10/10: this means that the sample has 10 repeat units in this region?

Thanks!