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WGLab / VirTect

Detection of viruses from RNA-Seq on human samples
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virus available #3

Open ibseq opened 4 years ago

ibseq commented 4 years ago

hello, what types of viruses can be tested with virtect? is there a database that comes with the package?

thanks ibseq

AtlasCUMC commented 4 years ago

yes, please look this file List_of_all_virus_genomes.xlsx, also if you are looking for some specific virus, we can add to the VirTect. Thanks, Atlas.

Atlas Khan, M.Sc., M.Phil, PhD

Department of Medicine Division of Nephrology Columbia University Medical Center (CUMC), New York, USA atlas.akhan@gmail.com ak4046@cumc.columbia.edu Tel: 212-851-5216

On Mon, Jan 6, 2020 at 8:53 AM ibseq notifications@github.com wrote:

hello, what types of viruses can be tested with virtect? is there a database that comes with the package?

thanks ibseq

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