search

WGLab / doc-ANNOVAR

Documentation for the ANNOVAR software
http://annovar.openbioinformatics.org
234 stars 359 forks source link

How to separate output lines by gene #155

Open zhuying412 opened 3 years ago

zhuying412 commented 3 years ago

is there a way to split the gene anno result to multiple lines by different gene?

kaichop commented 3 years ago

if you use annotate_variation, you can add -separate argument to have all types of annotations for each gene. Otherwise, you can parse the results yourself and separate annotation to each gene, if a mutation affects multiple genes.

On Sun, Aug 8, 2021 at 9:56 PM 朱赢(Ying Zhu) @.***> wrote:

is there a way to split the gene anno result to multiple lines by different gene?

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/WGLab/doc-ANNOVAR/issues/155, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABNG3OHJMI7UW7NHGVCMBSTT34YWRANCNFSM5BZDBNAQ .