WGLab / doc-ANNOVAR

Documentation for the ANNOVAR software
http://annovar.openbioinformatics.org
234 stars 359 forks source link

Update database `refGeneWithVer` #166

Closed ice1ce closed 3 years ago

ice1ce commented 3 years ago

Dear Prof:

Thanks for the excellent tool. Could you update the refGeneWithVer database, whose transcript version is not match the NCBI‘s. Actually, I want to use the newest transcript version to get the protein sequence. Thannks a lot!

asmlgkj commented 3 years ago

can get it from gft

ice1ce commented 3 years ago

can get it from gft Sorry, would you make it clear?

asmlgkj commented 3 years ago

gtf or gff has the latest updated transcript,

kaichop commented 3 years ago

The refGene, knownGene and ensGene are updated now.

On Mon, Oct 18, 2021 at 10:11 AM curry_fan @.***> wrote:

gtf or gff has the latest updated transcript,

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/WGLab/doc-ANNOVAR/issues/166#issuecomment-945814764, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABNG3OFF7ZTTL3WTZN7M44LUHQTJ5ANCNFSM5F7BPKXA .