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WGLab / doc-ANNOVAR

Documentation for the ANNOVAR software
http://annovar.openbioinformatics.org
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could the 1000 Genomes Project dataset be used to annotate WES data? #177

Open stroke1989 opened 2 years ago

stroke1989 commented 2 years ago

Hi, I'm a new to annovar, this is a excellent tool. I tried to use annovar to annotate my mutation called from WES data. could the 1000 Genomes Project dataset be used to annotate mutation called from WES data? the document showed this dataset is used for frequency of variants in _whole-genome_data . Hope your response! Appreciate1

kaichop commented 2 years ago

Yes it can be used for WES data as well. These are data sets that are relatively old, so you may want to check gnomad_exome and gnomad_genome instead.

On Wed, Jan 19, 2022 at 11:36 AM stroke1989 @.***> wrote:

Hi, I'm a new to annovar, this is a excellent tool. I tried to use annovar to annotate my mutation called from WES data. could the 1000 Genomes Project dataset be used to annotate mutation called from WES data? the document showed this dataset is used for frequency of variants in _whole-genome_data . Hope your response! Appreciate1

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