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WangX-Lab / PreMSIm

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Does it work for scRNA-seq data? #2

Open levinhein opened 3 years ago

levinhein commented 3 years ago

Hello. Does this work for scRNA-seq data? What are the changes that can be made to make it working in scRNA-seq data if it is possible?

WangX-Lab commented 3 years ago

Yes, it works. I do not think any changes are needed to use the tool for scRNA-Seq data.

发件人: noreply@github.com noreply@github.com 代表 levinhein 发送时间: Monday, October 12, 2020 5:51 PM 收件人: WangX-Lab/PreMSIm PreMSIm@noreply.github.com 抄送: Subscribed subscribed@noreply.github.com 主题: [WangX-Lab/PreMSIm] Does it work for scRNA-seq data? (#2)

Hello. Does this work for scRNA-seq data? What are the changes that can be made to make it working in scRNA-seq data if it is possible?

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levinhein commented 3 years ago

Thanks for your prompt reply! Does a scRNA-seq Seurat object (genes=row, cells=column) work as an input data to PreMSIm?

WangX-Lab commented 3 years ago 
        Yes.

        On 10/12/2020 18:05, levinhein wrote:

Thanks for your prompt reply! Does a scRNA-seq Seurat object (genes=row, cells=column) work as an input data to PreMSIm?

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levinhein commented 3 years ago

Thank you so much for confirming! Excited to discover things on my data using PreMSIm!