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Wangys-prog / prPred

Prediction plant resistance proteins (R proteins)
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Error WH_x #6

Open SamCT opened 2 years ago

SamCT commented 2 years ago

Hello, Thank you for the tool. I haven't been able to complete the test example, I am getting an error related to iFeature. Any insight on this?

Traceback (most recent call last): File "/etc/bin/iFeature/iFeature.py", line 55, in encodings = eval(myFun) File "", line 1, in File "/etc/bin/ifeature/iFeature/codes/DDE.py", line 60, in DDE tmpCode[j] = (tmpCode[j] - myTM[j]) / math.sqrt(myTV[j]) ZeroDivisionError: float division by zero etc/bin/prPred/prPred/codes/feature.py:67: FutureWarning: read_table is deprecated, use read_csv etc/bin/prPred/prPred/codes/feature.py:69: FutureWarning: read_table is deprecated, use read_csv Traceback (most recent call last): File "/local/cluster/lib/python3.7/site-packages/pandas-0.24.1-py3.7-linux-x86_64.egg/pandas/core/indexes/base.py", line 2656, return self._engine.get_loc(key) File "pandas/_libs/index.pyx", line 108, in pandas._libs.index.IndexEngine.get_loc File "pandas/_libs/index.pyx", line 132, in pandas._libs.index.IndexEngine.get_loc File "pandas/_libs/hashtable_class_helper.pxi", line 1601, in pandas._libs.hashtable.PyObjectHashTable.get_item File "pandas/_libs/hashtable_class_helper.pxi", line 1608, in pandas._libs.hashtable.PyObjectHashTable.get_item KeyError: 'WH_x'

Wangys-prog commented 2 years ago

I run /test/test.fasta on my computer using prPred and found no errors. Please check the input file format or ifeature installation.