(CookHLA.py) introduced '--save-Ambiguous-SNP' flag. now excludes amb…

WansonChoi / CookHLA

An accurate and efficient HLA imputation method.

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Closed WansonChoi closed 2 years ago

WansonChoi commented 2 years ago

CookHLA v1.0.1

now removes ambiguous SNPs by default.
If the '--save-Ambiguous-SNP' argument is given, then CookHLA saves the ambiguous SNPs based on the AF information just like SNP2HLA did.