Closed shu-hai closed 7 years ago
Connectome Workbench wb_command -cifti-smoothing
Hi, glasserm, I am not so familiar with Connectome Workbench. If I want to do 4mm FWHM for both surface and subcortical voxels, how to operate it in Connectome Workbench? Any example code?
I guess you'll just have to become familiar then. The usage available when you type the above command. You can download Connectome Workbench from here:
https://www.humanconnectome.org/software/connectome-workbench
Really this forum is only for issues with the pipeline code. For more general questions like the one you asked, it is better to ask on the hcp-users mailing list:
If you can read bash scripts, here is a line that uses the command:
The help info is also available online, see these two pages in particular:
https://www.humanconnectome.org/software/workbench-command/-cifti-smoothing https://www.humanconnectome.org/software/workbench-command/-arguments-help
As Matt said, though, this issue tracker is intended for reporting problems with the HCP Pipelines scripts themselves, and is not a general help forum.
Hello, I notice that grayordinates includes both the surface and subcortical voxels. Now I got some results on grayordinates, and I want to _spatially smooth_ the values using Gaussian kernels. Do you have any code and example to do such smoothing on surface vertices? Thanks.