WaveCNV / WaveCNV-caller

Cancer specific CNV caller for Next Generation sequence
3 stars 2 forks source link

--fasta option #5

Open sicotte opened 10 years ago

sicotte commented 10 years ago

Specifying a fasta does not work as the current version cannot use it and read chromosome names and sizes.

This means that bam files and vcf may have to be realigned with the hg19 version supplied with WaveCNV.