WayScience / CytoSnake-Benchmarks

CytoSnake benchmarks
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Benchmark image-based profiling scripts / pipelines from other data repos #2

Open axiomcura opened 11 months ago

axiomcura commented 11 months ago

The purpose of this benchmark is to demonstrate the performance of CytoSnake in comparison to other image-based profile processing pipelines.

The primary objective is to assess and compare the processing scripts employed in these repositories with CytoSnake, ultimately generating informative plots to illustrate the differences.

Here are some repos to benchmark:

axiomcura commented 10 months ago

It turns out that there is a jupyter integration with memray shown here however, this only produces flame graphs