Running `cytosnake` without args throws error and does not show CLI help

[gwaybio]

The README says "After this step, CytoSnake is installed. To check if CytoSnake is properly installed, simply type cytosnake to see the CLI documentation:"

But when I try, I receive the following error:

(cytosnake) waygr@CHAI-M-C02G83P CytoSnake % cytosnake
Traceback (most recent call last):
  File "/Users/waygr/miniforge3/envs/cytosnake/bin/cytosnake", line 8, in <module>
    sys.exit(run_cmd())
             ^^^^^^^^^
  File "/Users/waygr/repos/wayscience/CytoSnake/cytosnake/cli/cmd.py", line 40, in run_cmd
    args_handler = CliControlPanel(sys.argv)
                   ^^^^^^^^^^^^^^^^^^^^^^^^^
  File "<string>", line 10, in __init__
  File "/Users/waygr/repos/wayscience/CytoSnake/cytosnake/cli/args.py", line 110, in __post_init__
    self.__setup_args()
  File "/Users/waygr/repos/wayscience/CytoSnake/cytosnake/cli/args.py", line 235, in __setup_args
    raise InvalidArgumentException(
cytosnake.common.errors.InvalidArgumentException: No mode has been provided, please enter a mode

[axiomcura]

@gwaybio Thanks for submitting an issue!

After a quick look at the code, it seems that CytoSnake expects a mode; therefore, you would have to input cytosnake help in order for the CLI documentation to appear.

I can update the documentation by changing cytosnake to cytosnake help when attempting to test if the installation was successful.

let me know what you think!

[gwaybio]

Updating the documentation sounds like a good plan

[axiomcura]

@gwaybio Sounds good! I'll make PR applying the documentation changes. We can close this issue once the PR is merged!

[axiomcura]

Closing this issue! Feel free to reopen if the problem persists.