WayScience / CytoSnake

Orchestrating high-dimensional cell morphology data processing pipelines
https://cytosnake.readthedocs.io
Creative Commons Attribution 4.0 International
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Revamping `get_input_path()` #86

Open axiomcura opened 1 year ago

axiomcura commented 1 year ago

After successfully implementing helper functions that generate input and output paths in order to circumvent snakemake's strict pathing rules, there still happens to be a series of challenges that have not been solved yet.

Below are the documented issues associated: