WayScience / CytoSnake

Orchestrating high-dimensional cell morphology data processing pipelines

https://cytosnake.readthedocs.io

Creative Commons Attribution 4.0 International

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CytoSnake Bug Fixes From Cell-Health Data Usage #87

Closed axiomcura closed 1 year ago

axiomcura commented 1 year ago

modified from EmbeddedArtistry

Description

Thank you for your contribution to CytoSnake! Please succinctly summarize your proposed change. What motivated you to make this change?

Please also link to any relevant issues that your code is associated with.

This PR fixes bugs that were found and squashed on the cell-health dataset when using CytoSnake locally.

The next step is to make a release after this PR is merged, and use it as a dependency for the cell-health dataset

What is the nature of your change?

[X] Bug fix (fixes an issue).
[ ] Enhancement (adds functionality).
[ ] Breaking change (fix or feature that would cause existing functionality to not work as expected).
[ ] This change requires a documentation update.

Checklist

Please ensure that all boxes are checked before indicating that a pull request is ready for review.

[X] I have read the CONTRIBUTING.md guidelines.
[X] My code follows the style guidelines of this project.
[X] I have performed a self-review of my own code.
[X] I have commented my code, particularly in hard-to-understand areas.
[ ] I have made corresponding changes to the documentation.
[ ] My changes generate no new warnings.
[ ] New and existing unit tests pass locally with my changes.
[ ] I have added tests that prove my fix is effective or that my feature works.
[X] I have deleted all non-relevant text in this pull request template.

axiomcura commented 1 year ago

Alright all comments have been addressed! Merging !