Open axiomcura opened 11 months ago
Update: This is related to #41. Using a single input for the feature_select module is causing issues. Currently, the script requires a list of file paths, which is removes CytoSnake's multiprocessing (handled by Snakemake). However, we want users to have the option to do feature selection across all plates or choose specific features for each plate while maintaining flexibility.
This will be added into the next release project roadmap.
Looking at this code in
feature_select.py
code location hereIn addition, the
feature_select.smk
module also takes in a list of profiles, therefore removingsnakemake
parallelization hereIt would be best to remove the for loop and take advantage of
snakemake
's parallelization.