add cellprofiler option to idrstream

WayScience / IDR_stream

Software for feature extraction from IDR image data

BSD 3-Clause "New" or "Revised" License

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add cellprofiler option to idrstream #6

Closed jenna-tomkinson closed 1 year ago

jenna-tomkinson commented 2 years ago

@gwaybio @roshankern

Here is the PR for implementing CellProfiler into idrstream. Currently, the only issue left is with the environment and getting CellProfiler installed from the conda environment.

jenna-tomkinson commented 2 years ago

@gwaybio @roshankern

This PR is ready for your view now that the environment has been fixed.

jenna-tomkinson commented 2 years ago

@gwaybio @roshankern

The CellProfiler implementation is now working so please feel free to test this out now and review!

jenna-tomkinson commented 1 year ago

@gwaybio @roshankern @d33bs

Alright! Everything is committed and works. Please review when you get a chance!