This PR solves #1 and introduces a module for downloading the MitoCheck dataset from the Zenodo repository. The module downloads both raw and normalized feature-extracted profiles generated by CellProfiler (CP) and DeepProfiler (DP).
Additional Updates:
Added pre-commit hooks for code quality checks.
Introduced an .env file for environment variable management.
Updated .gitignore to include relevant files and directories.
NOTE The download does take around 75 minutes to complete.
Summary
This PR solves #1 and introduces a module for downloading the MitoCheck dataset from the Zenodo repository. The module downloads both raw and normalized feature-extracted profiles generated by CellProfiler (CP) and DeepProfiler (DP).
Additional Updates:
pre-commit
hooks for code quality checks..env
file for environment variable management..gitignore
to include relevant files and directories.NOTE The download does take around 75 minutes to complete.