This PR is the start of the single cell sample images module, which should provide a quick example of the model in action to new visitors. In correct_15_images.ipynb, we show 15 sample single cell images that the final model from 2.train_model correctly classifies.
Three single cell images from each of the 5 top performing classes (as determined by F1 score) are displayed and their paths are saved.
Note: Sample image files will be uploaded at the end of the PR, as including them here will make the review more difficult.
This is ready for review!
This PR is the start of the single cell sample images module, which should provide a quick example of the model in action to new visitors. In correct_15_images.ipynb, we show 15 sample single cell images that the final model from 2.train_model correctly classifies. Three single cell images from each of the 5 top performing classes (as determined by F1 score) are displayed and their paths are saved.
Note: Sample image files will be uploaded at the end of the PR, as including them here will make the review more difficult.
Sorry it is so large :(