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WayScience / phenotypic_profiling

Machine learning for predicting 15 single-cell phenotypes from cell morphology profiles
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Choice of MitoCheck Dataset #13

Closed roshankern closed 1 year ago

roshankern commented 1 year ago

Issue Purpose

This issue will outline the differences between the two datasets we have received from the MitoCheck consortium.

Dataset 1 (from Dr. Jean-Karim Hériché, dated 2006):

Extracted Features Location

Features are extracted in version 2 of mitocheck_data.

Structure

Dataset 2 (from Dr. Thomas Walter, dated 2015):

Extracted Features Location

Features are extracted in main version of mitocheck_data.

roshankern commented 1 year ago

Closing this issue as it has been resolved outside of GitHub. We are only using the newer dataset (2015). The sample images for this dataset have been uploaded at https://github.com/WayScience/phenotypic_profiling_model/tree/main/6.single_cell_images/mitocheck_single_cell_sample_images