Adding several publication ready figures [Figure 2, Supplementary Figs 2 and 3]

WayScience / phenotypic_profiling

Machine learning for predicting 15 single-cell phenotypes from cell morphology profiles

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Adding several publication ready figures [Figure 2, Supplementary Figs 2 and 3] #38

Closed gwaybio closed 1 year ago

gwaybio commented 1 year ago

Sorry for the long PR - it generates all figures (main and supplementary) for the first results subsection. I also needed to calculate all pairwise correlations between cells in order to plot pairwise correlation density curves.

Main figure

main_figure_2_umap_and_correlation

Supplementary Figures

supplementary_umap

supplementary_pairwise_correlations

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gwaybio commented 1 year ago

Please feel free to continue discussions in each thread, but I will merge for now!