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Weeks-UNC
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RNAvigate
Very flexible tools for plotting and analyzing all kinds of RNA structure data
MIT License
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Request for wrapper function
#35
scottallen877
opened
2 months ago
0
plot_arcs_compare
#34
scottallen877
opened
6 months ago
1
PlotQC breaks with Shapemapper_v2.2.0
#33
scottallen877
opened
6 months ago
1
LinReg plots axis titles switched
#32
scottallen877
closed
6 months ago
2
Custom Profile?
#31
MSz999
opened
6 months ago
2
Not showing sequence and bar plots with region argument when region start < 1
#30
SimonFelder
closed
6 months ago
4
Region flag is not properly handled in arc_plots_compare
#29
SimonFelder
opened
8 months ago
4
V1.0.0 fixes
#28
Psirving
closed
8 months ago
0
LinReg plots are broken for >2 samples
#27
jwinstonarney
closed
8 months ago
1
Documentation not displaying properly - Arcplots panels
#26
jwaldern
closed
8 months ago
1
Uninformative error for missing or misnamed input files
#25
davidqiu54
opened
9 months ago
0
Names mixed up in plot_arcs_compare
#24
SimonFelder
closed
8 months ago
1
Incorrect handling of NSD files with multiple structures
#23
jwaldern
opened
11 months ago
1
v1.0.0
#22
Psirving
closed
11 months ago
0
DeltaSHAPE does not work when comparing sequences with deletions
#21
jwaldern
closed
7 months ago
1
New features
#20
Psirving
closed
1 year ago
0
Pairprob base coloring
#19
bmunn99
closed
1 year ago
1
Specifying a region for "plot_arcs_compare" returns Value error
#18
bmunn99
closed
1 year ago
3
QC plot margins cut off plot elements on exported images
#17
scottallen877
closed
8 months ago
2
Does not accept .VARNA structure drawings from VARNA 3.9
#16
scottallen877
closed
1 year ago
3
New features
#15
Psirving
closed
1 year ago
0
Lines connecting nucleotides in Pseudoknot are not complete in secondary structure diagram
#14
abhishekdey83
closed
1 year ago
1
Circ plots do not display with large sequence
#13
jwaldern
closed
1 year ago
3
plot_circle requires a profile to assign color; problem for JuMP data
#12
jwaldern
closed
2 years ago
4
Arc plots with interaction data requires a ct file
#11
jwaldern
closed
1 year ago
2
site_list off by 1 error
#10
Psirving
closed
1 year ago
1
lowercase format not kept for bases in varna files
#9
scottallen877
closed
1 year ago
1
Error when loading shapemap profiles for skyline array plots
#8
davidqiu54
closed
2 years ago
4
Removing complimentary PAIRS from arcplots
#7
jwinstonarney
closed
2 years ago
1
arc plots for long transcripts (>3500 bases) crash program
#6
scottallen877
closed
2 years ago
2
filtering arc plot contact distance on regional plot runs forever
#5
scottallen877
closed
2 years ago
2
Tiny Secondary structures get squished
#4
VonBoss
closed
1 year ago
1
Ability to modify sequence bar in plots
#3
davidqiu54
closed
2 years ago
1
Objectified
#2
Psirving
closed
3 years ago
0
Support for Deletions/Insertions when plotting 3d Structures on PDB files
#1
davidqiu54
closed
2 years ago
1