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WeiliWw / VirHostMatcher-Net

VirHostMatcher-Net: A network-based computational tool for predicting virus-host interactions.
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TypeError when running #13

Closed KennthShang closed 3 years ago

KennthShang commented 3 years ago

Hi,

I got a TypeError when running the software, do you have any idea how to solve it? image

WeiliWw commented 3 years ago

Could you provide the command and data you used?

KennthShang commented 3 years ago

The command is: python VirHostMatcher-Net.py -q input/ --short-contig -o output -t 8 An example of the data is in the attachment contig.zip

KennthShang commented 3 years ago

Hi, it seems all the data and pre-feature cannot be downloaded. The webpage is inaccessible. Do you have any idea?

WeiliWw commented 3 years ago

Thanks for providing the data! There is actually a bug when no CRISPR match is found for any query genomes. It's fixed in today's commit.

For the webpage issue, let me contact the service team in the school. If the service is deprecated, I will try to put the data somewhere else. Will update this thread by the end of this week.

KennthShang commented 3 years ago

Good to know! Thanks a lot

WeiliWw commented 3 years ago

Hi, I updated the download links - please let me know if there are any issues. Thanks!