Please provide a valid path to a directory with all required data

WeiliWw / VirHostMatcher-Net

VirHostMatcher-Net: A network-based computational tool for predicting virus-host interactions.

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Please provide a valid path to a directory with all required data #25

Open marweena opened 2 years ago

marweena commented 2 years ago

This is my first time using this program and I keep getting the title error even though I have provided the correct arguments.

This is the command I ran. The directory for the input only has a fasta file from VirSorter2. The fasta file contains contigs that can be from any number of viruses. /home/data/installed_programs/viruses/VirHostMatcher-Net/VirHostMatcher-Net.py -q ./ --short-contig -o test/ &

Is there a way to fix this problem? Thanks in advanced.

WeiliWw commented 2 years ago

Hi, It tried to read the data_dir/ under VirHostMatcher-Net/. If you have followed https://github.com/WeiliWw/VirHostMatcher-Net#data-preparation to download and unpack the data. Could you try to use -d to specify the data directory name?