WhitakerLab BrainsForPublication issues

WhitakerLab / BrainsForPublication

Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon

MIT License

31 stars 23 forks source link

issues

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The code 'show_cluster_in_volume.py' cannot run.

#42 nylsp opened 1 year ago
0
BrainsForPublication not printing input values on images

#41 csleo95 opened 2 years ago
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[WIP] Updating documentation for pysurfer plotting script

#40 MatildeVaghi opened 6 years ago
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[WIP] Updating documentation

#39 MatildeVaghi closed 6 years ago
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Add some inflated examples

#38 KirstieJane closed 6 years ago
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remade test PNGS for HCP & economo

#37 KirstieJane closed 6 years ago
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Add more information about the zenodo doi

#36 KirstieJane closed 6 years ago
3
FIX: updates affiliation of michael notter

#35 miykael closed 6 years ago
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Acknowledge contributors

#34 KirstieJane opened 6 years ago
2
Add a Gitter chat badge to README.md

#33 gitter-badger closed 6 years ago
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Contributing more visualizations

#32 lrq3000 opened 6 years ago
1
Need to catch NaN values and convert them to -99

#31 SarahMorgan opened 6 years ago
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Fix typo in zenodo.json file

#30 KirstieJane closed 6 years ago
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Add additional parcellations for surface visualisations

#29 KirstieJane closed 6 years ago
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Changed pysurfer link from MNI glass brain to pysurfer

#28 SarahMorgan closed 6 years ago
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FIX: sets output image type according to input value

#27 miykael closed 6 years ago
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New Visualization: Glassbrain in slices

#26 miykael closed 7 years ago
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FIX: show all possible figure extensions in notebook

#25 miykael closed 7 years ago
0
Atlas Lookup via MNI-coordinate

#24 miykael opened 8 years ago
1
ENH: extends input parameters and changes notebook layout

#23 miykael closed 8 years ago
2
Cleanup of cluster_visualization notebook as well as initiation of glass_brain notebook

#22 miykael closed 8 years ago
1
More interactive version of Jupyter Notebook, that doesn't need dropbox links or similar

#21 miykael closed 8 years ago
1
Initial pull for interactive jupyter notebook interface

#20 miykael closed 8 years ago
1
Update requirements.md file

#19 KirstieJane opened 8 years ago
10
Consider adding this project to mybinder

#18 KirstieJane closed 8 years ago
1
Making pictures of functional clusters

#17 KirstieJane opened 8 years ago
2
Lower boundary doesn't work for mni_glass_brain

#16 KirstieJane opened 8 years ago
0
Make video/gif that goes through all slices of high res volume

#15 KirstieJane opened 8 years ago
2
Plotting values on surface using pysurfer

#14 KirstieJane opened 8 years ago
0
Who are the users of this project?

#13 KirstieJane opened 8 years ago
0
What should be featured in the GigaScience report?

#12 KirstieJane opened 8 years ago
0
Showing thresholded and unthresholded maps using outlines and transparency

#11 chrisgorgo closed 8 years ago
1
Multiple slices with activation

#10 KirstieJane opened 8 years ago
2
Alluvial diagrams

#9 rb643 opened 8 years ago
0
Overlaying nodal network characteristics onto freesurfer mappings (*.annot)

#8 rb643 opened 8 years ago
1
Showing thresholded and unthresholded maps using outlines and transparency

#7 KirstieJane opened 8 years ago
2
Online rendering of statisical maps in NeuroVault

#6 KirstieJane opened 8 years ago
7
Activation maps using pysurfer

#5 KirstieJane opened 8 years ago
0
Create interactive plots in plotly

#4 KirstieJane opened 8 years ago
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Where's the best place for documentation?

#3 KirstieJane opened 8 years ago
1
Roadmap

#2 KirstieJane opened 8 years ago
0
NII->VTK->Render

#1 cMadan opened 8 years ago
2