Setting and reporting the random seed for random graphs

WhitakerLab / scona

Code to analyse structural covariance brain networks using python.

https://whitakerlab.github.io/scona/

MIT License

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Setting and reporting the random seed for random graphs #77

Closed Islast closed 5 years ago

Islast commented 6 years ago

To ensure reproducibility of BrainNetworksInPython analyses, we would like to be able to set and record the random seeds used to generate random graphs. networkx doesn't currently support this, and in our regression tests we handle this by setting the global seed. In the present dev branch of networkx they are introducing this functionalty link. It might be best to hold on until this release.

Islast commented 6 years ago

https://github.com/ME-ICA/tedana/issues/87

Islast commented 5 years ago

networkx version later than 2.2 is now required for this reason