Update Cylc to handle new FSD

Initial To-Dos:

[x] make a new Cylc template for FSD routine: https://github.com/WilhelmusLab/ebseg/pull/43
[ ] auto populate the Jinja template with the flag needed to trigger FSD in the CLI preprocessing wrapper

This needs a lot of changes to the IceFloeTracker.jl, ebseg and ice-floe-tracker-pipeline repos. More detailed To-Dos:

IceFloeTracker.jl

[ ] Add support for labeled segmented floe images in https://github.com/WilhelmusLab/IceFloeTracker.jl/pull/458
- [x] _pairfloes
- [x] addfloemasks!
- [x] bwtraceboundary
- [x] cropfloe
[ ] Add support for floating point centroids in convertcentroid! (either by
- updating lookup code to round the numbers as in the prototype, or https://github.com/WilhelmusLab/IceFloeTracker.jl/pull/458
- doing a proper affine transformation.)
[x] Fix a broken call to sort! in find_reflectance_peaks (this seems to be fixed. Might not need to do it.)
[ ] Fix conda environment creation (see #177 for how to do this in the pipeline repo)

[ ] chore: remove extra pytest configuration for vscode
[x] feature: add better parsing of bounding boxes (allow different formats) https://github.com/WilhelmusLab/ebseg/pull/60
[x] feature: add support for falsecolor band 721 https://github.com/WilhelmusLab/ebseg/pull/59
[x] refactor: get_region_properties rename props in output file to match IceFloeTracker.jl https://github.com/WilhelmusLab/ebseg/pull/61
[x] feature: get_region_properties add bounding box and convex area https://github.com/WilhelmusLab/ebseg/pull/61

[ ] Add a docker container for SOIT #175
[ ] Update SOIT to use pipx and inline dependency #175
[ ] update pass_time.py to remove duplication of aqua/terra code, use an ISO 8601 date format (rather than MM-DD-YYYY)

[ ] refactor: merge Julia files into a single directory IFTPipeline.jl with src/ and test/ and the Project.toml and Manifest.toml files. #170
[ ] Set up CLI wrapper to write to STDOUT and STDERR by default (use 2>&1 file syntax to redirect to file if needed) #179
[ ] Set up CLI wrapper to handle a --debug flag to write more output to terminal
Add a version of the following tasks to work on single generic files (TIFF, CSV), including CLI and tests:
- [ ] landmask generation
- [ ] preprocessing
- [ ] extract features
- [ ] export to H5 files
Add a version of the following tasks to work on explicit collections of generic files (TIFF, CSV) including CLI and tests:
- [ ] track floes
[ ] refactor: make new version of the cylc workflow which uses the single file inputs and outputs
[ ] make a docker container which has an entry point for the IFT CLI application. #174
[x] extend choose_dtype function with new types #169

[ ] feature: add docker support to new cylc workflow file, but don't lose the ability to run locally
[ ] chore: clean up cylc files – there should be one canonical cylc file which has all the options