WormBase / ACKnowledge

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Paper 57005, gene extraction problem #132

Closed draciti closed 5 years ago

draciti commented 5 years ago

@valearna this is for you to check: The authors have added trx-1 ( WBGene00015062 ) and Removed: Bm1_46700A ( WBGene00222771 ): trx-1 is asynonym of Bm1_46700A: TAG2510, Bm1_46705, Bm1_46700A, trx-1. It seems that instead of trx-1, the pipeline extracted Bm1_46700A. This might be fixed already as we changed the order of priorities, e.g. locus, sequence, synonym

Can you please check?

valearna commented 5 years ago

Thanks @draciti for bringing up this example. I ran the pipeline in debug mode on paper 57005 with the new priorities and I see trx-1 extracted instead of Bm1_46700A. This means that this issue is solved and won't affect future extractions.

draciti commented 5 years ago

Wonderful! closing