WormBase / pseudoace

Modelling the WormBase ACeDB database in datomic.
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Fix report comparison issues #35

Closed mgrbyte closed 8 years ago

mgrbyte commented 8 years ago
mgrbyte commented 8 years ago

@gw3 Are there any classes which use temporary ids which are never the same across releases?

gw3 commented 8 years ago

The Protein IDs are not guaranteed to remain constant between releases. The Transcript IDs with Method=Coding_transcript are not guaranteed to remain constant.

There is however a majority of instances in these two objects that will retain a consistent ID. Gary

On 19/04/16 17:21, Matt Russell wrote:

@gw3 https://github.com/gw3 Are there any classes which use temporary ids which are never the same across releases?

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mgrbyte commented 8 years ago

Closing.

After 08210be13833f14aa4cbb42f58050922bdbbd711, when the missing vs added counts in the report differ and both are non-zero, we write two files such that we easily run diff over the ids between what was in the reference data vs the database.