WormBase / variant-first-pass

Variant First Pass Pipeline
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Extract genotypes #9

Open valearna opened 3 years ago

valearna commented 3 years ago

Another thing it would be nice to pull out of the papers is genotype, eg ksIs2 [Pdaf-7p::GFP + rol-6(su1006)] or agls17[Pmyo-2::mCherry + Pirg-1::GFP]. For variants we are focusing on the names, but for Karen's transgenes and constructs we'd probably want to extract the genotypes too, if they are not already captured elsewhere?

(from slack conversation with @MagdalenaZZ)