WrightonLabCSU / DRAM

Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
GNU General Public License v3.0
239 stars 50 forks source link

DRAM2 to spot unexpected combo? #267

Open Kirk3gaard opened 1 year ago

Kirk3gaard commented 1 year ago

Have you considered a flag to point out unexpected combinations of annotations that hint of either a Nature paper level discovery or genome contamination?

An example could be the discovery of a complete nitrification pathway in a single organism before the comammox papers.

For massive MAG projects it would be a cool way to hint at what organisms might require more attention 😁